BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035C12SP1|AL430033
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1158 1738 0.0
>3x_Contig1158
Length = 4503
Score = 1738 bits (875), Expect = 0.0
Identities = 878/881 (99%)
Strand = Plus / Plus
Query: 1 atccgtatgtcacagatgaactcgttcaccatgtaccaggggatggcaatcagaagcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1812 atccgtatgtcacagatgaactcgttcaccatgtaccaggggatggcaatcagaagcatg 1871
Query: 61 gatgtgaacatcatagatgcaggtaatgaccagccaatcaagtattattacccgttagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872 gatgtgaacatcatagatgcaggtaatgaccagccaatcaagtattattacccgttagca 1931
Query: 121 tctacatatttcttcttcaaccatttaccctggaaattgacagaatacttcgctggattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1932 tctacatatttcttcttcaaccatttaccctggaaattgacagaatacttcgctggattc 1991
Query: 181 gtggttctatgtggcttattactgatctcatcgattcctatcttgggacccttcatcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1992 gtggttctatgtggcttattactgatctcatcgattcctatcttgggacccttcatcttc 2051
Query: 241 cataccctaatttcacccttcataacaagactatattgggcaccatacctaagatacctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2052 cataccctaatttcacccttcataacaagactatattgggcaccatacctaagatacctg 2111
Query: 301 amagtggataacttacaaagagaaacaagattttacaagatgatgggccaatatatcgca 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2112 aaagtggataacttacaaagagaaacaagattttacaagatgatgggccaatatatcgca 2171
Query: 361 ttcggacttgtcgctggacagttggaatcatggcccatcgtatcagcacttgcatactct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2172 ttcggacttgtcgctggacagttggaatcatggcccatcgtatcagcacttgcatactct 2231
Query: 421 gctcatgccatagccatctgccagtgggcacaagatctgcctacactattgaactagata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2232 gctcatgccatagccatctgccagtgggcacaagatctgcctacactattgaactagata 2291
Query: 481 catatatmattctcctatctccaactttagctatagatctacacctatgatataagttaa 540
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2292 catatataattctcctatctccaactttagctatagatctacacctatgatataagttaa 2351
Query: 541 gcctccacagttttcttaatcggaactatggatcaacgaaagavatcctttccaaattca 600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2352 gcctccacagttttcttaatcggaactatggatcaacgaaagaaatcctttccaaattca 2411
Query: 601 atcaatatctatttcctgattcgatttcctaacactctttttttttttttttttttaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2412 atcaatatctatttcctgattcgatttcctaacactctttttttttttttttttttaaat 2471
Query: 661 ttcctgcccacttccgatgtccacttttcttgcagaaattgtcgcagcagtggctggggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2472 ttcctgcccacttccgatgtccacttttcttgcagaaattgtcgcagcagtggctggggt 2531
Query: 721 ttggaactgacacaccaggacaaacaggtgagcattaatttcaaggaaacttgagaaaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2532 ttggaactgacacaccaggacaaacaggtgagcattaatttcaaggaaacttgagaaaaa 2591
Query: 781 aaattgaaataaaactaaactgaaagcctttttaatcttctaaccctttgtgcagcgtga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2592 aaattgaaataaaactaaactgaaagcctttttaatcttctaaccctttgtgcagcgtga 2651
Query: 841 tactttgccggtatctctttgtatattcttgggatacactt 881
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2652 tactttgccggtatctctttgtatattcttgggatacactt 2692
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,018
Number of Sequences: 1807
Number of extensions: 20018
Number of successful extensions: 3759
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)